ACID_code
Contents:
Installation and Setup
Tutorials - Using ACID
ACID API
Development and Issues
ACID_code
Index
Index
A
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B
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C
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D
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E
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F
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G
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I
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L
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M
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N
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O
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P
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R
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S
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T
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U
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V
|
W
A
Acid (class in ACID_code)
ACID() (ACID_code.Acid method)
(in module ACID_code)
ACID_code.utils
module
ACID_HARPS() (ACID_code.Acid method)
(in module ACID_code)
alpha (ACID_code.Data attribute)
append() (ACID_code.DataList method)
Array1D (in module ACID_code)
Array2D (in module ACID_code)
Array3D (in module ACID_code)
auto_window() (in module ACID_code.utils)
autocorr_func_1d() (in module ACID_code.utils)
autocorr_gw2010() (in module ACID_code.utils)
autocorr_new() (in module ACID_code.utils)
B
backend_to_sampler() (in module ACID_code.utils)
C
c_factor (ACID_code.Data attribute)
calc_alpha() (ACID_code.LSD method)
calc_cholesky() (ACID_code.LSD static method)
calc_deltav() (in module ACID_code)
(in module ACID_code.utils)
clip_wavelengths() (in module ACID_code.utils)
collapse_SNR() (in module ACID_code.utils)
combine_profiles() (ACID_code.DataList method)
(in module ACID_code.utils)
combine_spec() (ACID_code.Acid method)
combined_profile (ACID_code.Data attribute)
(ACID_code.DataList property)
complete (ACID_code.Data attribute)
config (ACID_code.Data property)
Config (class in ACID_code)
configure_mp_environ() (in module ACID_code.utils)
continue_sampling() (ACID_code.Acid method)
(ACID_code.Result method)
continuum_model (ACID_code.Data attribute)
continuumfit() (ACID_code.Acid method)
convert_moves_to_emcee() (in module ACID_code.utils)
convolve_profile() (ACID_code.LSD class method)
D
Data (class in ACID_code)
data_attributes (ACID_code.Config attribute)
data_attributes_input_str (ACID_code.Config attribute)
data_list (ACID_code.DataList property)
DataList (class in ACID_code)
defaults (ACID_code.Config attribute)
deterministic_model() (ACID_code.MCMC method)
drop_edges() (in module ACID_code.utils)
drop_invalid() (in module ACID_code.utils)
drop_invalid_lines() (ACID_code.LineList static method)
dynesty_logprob() (ACID_code.MCMC method)
E
errors (ACID_code.Data attribute)
exception (ACID_code.Data attribute)
F
findfiles() (in module ACID_code.utils)
fit_gaussian() (ACID_code.Profiles method)
fit_lorentzian() (ACID_code.Profiles method)
fit_profile() (ACID_code.DataList method)
fit_voigt() (ACID_code.Profiles method)
FloatLike (in module ACID_code)
flux (ACID_code.Data attribute)
flux_to_od() (in module ACID_code.utils)
forward_errors (ACID_code.Data attribute)
forward_model (ACID_code.Data attribute)
forward_x (ACID_code.Data attribute)
from_datalist() (ACID_code.DataList class method)
from_dict() (ACID_code.Data method)
full_model() (ACID_code.MCMC method)
G
gaussian_func() (ACID_code.Profiles static method)
get_available_memory() (in module ACID_code.utils)
get_masks() (ACID_code.MaskingLines method)
get_normalisation_coeffs() (in module ACID_code.utils)
guess_errors() (in module ACID_code.utils)
guess_SNR() (in module ACID_code.utils)
I
initial_model_inputs (ACID_code.Data attribute)
initial_profile (ACID_code.Data attribute)
initial_profile_errors (ACID_code.Data attribute)
initial_state (ACID_code.Data attribute)
initiate_sampler() (ACID_code.Result method)
IntLike (in module ACID_code)
L
linelist (ACID_code.Data property)
LineList (class in ACID_code)
lines (ACID_code.MaskingLines attribute)
ll (ACID_code.LineList attribute)
load() (ACID_code.Data class method)
(ACID_code.DataList class method)
(ACID_code.Result class method)
log_prior() (ACID_code.MCMC method)
log_probability() (ACID_code.MCMC method)
lorentzian_func() (ACID_code.Profiles static method)
LSD (class in ACID_code)
M
mask_invalid() (in module ACID_code.utils)
masking_lines (ACID_code.Config property)
MaskingLines (class in ACID_code)
MCMC (class in ACID_code)
mcmc_time (ACID_code.Data attribute)
model_function (ACID_code.MCMC attribute)
model_inputs (ACID_code.Data attribute)
module
ACID_code.utils
N
nanmask (ACID_code.Data attribute)
ndim (ACID_code.Data attribute)
next_pow_2() (in module ACID_code.utils)
nsteps (ACID_code.Data attribute)
nwalkers (ACID_code.Data attribute)
O
od_to_flux() (in module ACID_code.utils)
P
plot_acf() (ACID_code.Result method)
plot_autocorrelation() (ACID_code.Result method)
plot_combined_profile() (ACID_code.DataList method)
plot_continuum_fit() (ACID_code.Data method)
plot_corner() (ACID_code.Result method)
plot_fit() (ACID_code.Profiles method)
plot_forward_model() (ACID_code.Result method)
plot_linelist() (ACID_code.Data method)
plot_masking_lines() (ACID_code.Config method)
plot_profiles() (ACID_code.Result method)
plot_residual_masking() (ACID_code.Data method)
plot_traceplot() (ACID_code.Result method)
plot_walkers() (ACID_code.Result method)
plotting_variables (ACID_code.Data attribute)
poly_inputs (ACID_code.Data attribute)
print_defaults() (ACID_code.Config class method)
process_results() (ACID_code.Result method)
profiles (ACID_code.Data attribute)
Profiles (class in ACID_code)
properties (ACID_code.Config attribute)
ptform() (ACID_code.MCMC method)
R
reset() (ACID_code.Data method)
residual_mask() (ACID_code.Acid method)
residual_masks (ACID_code.Data attribute)
result (ACID_code.Acid property)
(ACID_code.Data property)
Result (class in ACID_code)
results_time (ACID_code.Data attribute)
robust_mean() (in module ACID_code.utils)
run_ACID() (ACID_code.DataList method)
run_LSD() (ACID_code.LSD method)
run_mcmc() (ACID_code.Acid method)
run_mcmc_until_converged() (ACID_code.Acid method)
S
sampler (ACID_code.Acid property)
(ACID_code.Data property)
(ACID_code.Result property)
sampler_nbytes() (in module ACID_code.utils)
save() (ACID_code.Data method)
(ACID_code.DataList method)
(ACID_code.Result method)
save_backend_to_hdf5() (in module ACID_code.utils)
save_dir (ACID_code.DataList property)
Scalar (in module ACID_code)
set_dict_defaults() (in module ACID_code.utils)
set_inputs() (ACID_code.Data method)
set_order_range() (ACID_code.DataList method)
setup_time (ACID_code.Data attribute)
sn (ACID_code.Data attribute)
sn_clip() (ACID_code.LSD method)
solve_z() (ACID_code.LSD static method)
sort_by_order() (ACID_code.DataList method)
T
to_dict() (ACID_code.Config method)
(ACID_code.Data method)
to_full_dict() (ACID_code.Config method)
total_time (ACID_code.Data attribute)
traceback (ACID_code.Data attribute)
U
update_hipri() (ACID_code.Config method)
update_lowpri() (ACID_code.Config method)
V
validate_linelist() (ACID_code.LineList static method)
validate_lines() (ACID_code.MaskingLines static method)
velocities (ACID_code.Data property)
verbose (ACID_code.Config property)
voigt_func() (ACID_code.Profiles static method)
W
wavelengths (ACID_code.Data attribute)